Nextflow Modules
Showing module(s) with keyword "simulation"
| Module | Keywords | Description |
|---|---|---|
| nf-core/hmmer/hmmemit | hidden markov model HMM hmmer sequence emission simulation profile | emit sequences from a profile HMM |
| nf-core/holodeck/eval | simulation evaluation alignment accuracy benchmarking | Evaluate alignment accuracy of holodeck-simulated reads |
| nf-core/holodeck/methylate | simulation vcf methylation bisulfite benchmarking | Generate a methylation-annotated VCF from a reference genome with holodeck |
| nf-core/holodeck/mutate | simulation vcf mutations variants benchmarking | Generate a VCF of random mutations from a reference genome with holodeck |
| nf-core/holodeck/simulate | simulation fastq reads sequencing benchmarking | Simulate sequencing reads from a reference genome with holodeck |
| nf-core/survivor/simsv | structural variants simulation sv vcf | Simulate an SV VCF file based on a reference genome |