Nextflow Modules
Showing module(s) with keyword "linkage disequilibrium and minor allele frequency stratification"
| Module | Keywords | Description |
|---|---|---|
| nf-core/gcta/bivariateremlldms | gcta genome-wide complex trait analysis reml restricted maximum likelihood bivariate ldms linkage disequilibrium and minor allele frequency stratification grm genetic relationship matrix genetics | Run bivariate REML-LDMS analysis with an MGRM manifest |
| nf-core/gcta/calculateldscores | gcta genome-wide complex trait analysis ld score linkage disequilibrium score ldms linkage disequilibrium and minor allele frequency stratification genetics | Calculate LD scores with GCTA and derive GREML-LDMS SNP groups |
| nf-core/gcta/remlldms | gcta genome-wide complex trait analysis reml restricted maximum likelihood ldms linkage disequilibrium and minor allele frequency stratification grm genetic relationship matrix genetics | Run REML-LDMS heritability estimation with an MGRM manifest |