Nextflow Modules
Showing module(s) with keyword "alignment-mode"
| Module | Keywords | Description |
|---|---|---|
| nf-core/oarfish/alignmentmode | bam transcript quantification alignment-mode | oarfish is a program for quantifying transcript-level expression from long-read sequencing technologies. Quantify pre-computed alignments of reads to the transcriptome (a name-sorted BAM, e.g. from minimap2/pbmm2). |